SNP Detail For rs4704296
1.Mapping Information
Human SNP ID rs4704296
Human chromosome chr5
Human SNP position 76206585
Pig chromosome chr2
Pig SNP position 86693431
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine - clinic-based
Initial sample5,175 European ancestry clinic-based cases, 13,972 European ancestry clinic-based controls
Replication sampleNA
Region5q13.3
Chromosome idchr5
Chromosome position76206585
Reported geneintergenic
Mapped geneSV2C
Upstream gene id
Downstream gene id
SNP gene ids22987
Upstream gene distance
Downstream gene distance
SNP risk allelers4704296-?
SNPsrs4704296
Merged0
SNP id current4704296
Contextintron_variant
Intergenic0
Allele frequency0.53
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.11
%95 Ci[1.06-1.18]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002079