SNP Detail For rs4700319
1.Mapping Information
Human SNP ID rs4700319
Human chromosome chr5
Human SNP position 59037981
Pig chromosome chr16
Pig SNP position 40710491
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position59037981
Reported genePDE4D
Mapped genePDE4D
Upstream gene id
Downstream gene id
SNP gene ids5144
Upstream gene distance
Downstream gene distance
SNP risk allelers4700319-T
SNPsrs4700319
Merged0
SNP id current4700319
Contextintron_variant
Intergenic0
Allele frequency0.228
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.011
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264