SNP Detail For rs4698169
1.Mapping Information
Human SNP ID rs4698169
Human chromosome chr4
Human SNP position 17133720
Pig chromosome chr8
Pig SNP position 11893447
2.Annotation Information
PubMed ID22365631
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22365631
StudyGenome-wide association study of temperament in bipolar disorder reveals significant associations with three novel Loci.
Disease/TraitTemperament (bipolar disorder)
Initial sample1,263 European ancestry cases, 1,434 European ancestry controls
Replication sampleNA
Region4p15.32
Chromosome idchr4
Chromosome position17133720
Reported geneintergenic
Mapped geneLOC105374507 - LOC101929123
Upstream gene id105374507
Downstream gene id101929123
SNP gene ids
Upstream gene distance51105
Downstream gene distance38037
SNP risk allelers4698169-?
SNPsrs4698169
Merged0
SNP id current4698169
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(Anxious)
Or beta2.11
%95 Ci[NR] unit increase
PlatformAffymetrix [703012]
CNVN
Mapped traitbehavior or behavioral disorder measurement, personality trait, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004782, http://www.ebi.ac.uk/efo/EFO_0004365, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001419