SNP Detail For rs467650
1.Mapping Information
Human SNP ID rs467650
Human chromosome chr5
Human SNP position 98633749
Pig chromosome chr2
Pig SNP position 108824765
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region5q15 x 14q23.1
Chromosome idchr5 x 14
Chromosome position98633749 x 58705860
Reported geneNR x NR
Mapped geneKRT8P32 - DDX18P4 x DACT1 - LOC102723725
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers467650-? x rs7153749-?
SNPsrs467650 x rs7153749
Merged0
SNP id current
Contextintergenic_variant x intergenic_variant
Intergenic
Allele frequency
P value0.00000001
Pvalue mlog8
P value text
Or beta1.4925
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913