SNP Detail For rs4674024
1.Mapping Information
Human SNP ID rs4674024
Human chromosome chr2
Human SNP position 215766643
Pig chromosome chr15
Pig SNP position 130797830
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking initiation
Initial sample754 Bangladeshi ancestry never smoker males, 2,565 Bangladeshi ancestry never smoker females, 1,837 Bangladeshi ancestry ever smoker males, 198 Bangladeshi ancestry ever smoker females
Replication sampleNA
Region2q35
Chromosome idchr2
Chromosome position215766643
Reported geneLINC00607
Mapped geneLINC00607
Upstream gene id
Downstream gene id
SNP gene ids646324
Upstream gene distance
Downstream gene distance
SNP risk allelers4674024-?
SNPsrs4674024
Merged0
SNP id current4674024
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text(males)
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST002396