Human SNP ID | rs4673553 |
---|---|
Human chromosome | chr2 |
Human SNP position | 210743655 |
Pig chromosome | chr15 |
Pig SNP position | 125338994 |
PubMed ID | 25811787 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25811787 |
Study | Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. |
Disease/Trait | Urate levels in obese individuals |
Initial sample | 4,613 European ancestry male individuals, 4,690 European ancestry female individuals, 142 European ancestry individuals |
Replication sample | NA |
Region | 2q34 |
Chromosome id | chr2 |
Chromosome position | 210743655 |
Reported gene | CPS1 |
Mapped gene | CPS1 - RPS27P10 |
Upstream gene id | 1373 |
Downstream gene id | 646233 |
SNP gene ids | |
Upstream gene distance | 64548 |
Downstream gene distance | 555223 |
SNP risk allele | rs4673553-G |
SNPs | rs4673553 |
Merged | 0 |
SNP id current | 4673553 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.45 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (women) |
Or beta | 0.099 |
%95 Ci | [0.058-0.14] kg/m2 decrease |
Platform | Affymetrix, Illumina [at least 188473] (imputed) |
CNV | N |
Mapped trait | obese body mass index status, urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007041, http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST002828 |