SNP Detail For rs4660456
1.Mapping Information
Human SNP ID rs4660456
Human chromosome chr1
Human SNP position 40773839
Pig chromosome chr6
Pig SNP position 157458236
2.Annotation Information
PubMed ID21507922
JournalClin Infect Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/21507922
StudyDuffy-null-associated low neutrophil counts influence HIV-1 susceptibility in high-risk South African black women.
Disease/TraitPlatelet count
Initial sample115 African ancestry HIV-negative individuals
Replication sampleNA
Region1p34.2
Chromosome idchr1
Chromosome position40773839
Reported geneNFYC
Mapped geneNFYC - KCNQ4
Upstream gene id4802
Downstream gene id9132
SNP gene ids
Upstream gene distance2236
Downstream gene distance10173
SNP risk allelers4660456-?
SNPsrs4660456
Merged0
SNP id current4660456
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformIllumina [874956]
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001061