Human SNP ID | rs4660456 |
---|---|
Human chromosome | chr1 |
Human SNP position | 40773839 |
Pig chromosome | chr6 |
Pig SNP position | 157458236 |
PubMed ID | 21507922 |
---|---|
Journal | Clin Infect Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/21507922 |
Study | Duffy-null-associated low neutrophil counts influence HIV-1 susceptibility in high-risk South African black women. |
Disease/Trait | Platelet count |
Initial sample | 115 African ancestry HIV-negative individuals |
Replication sample | NA |
Region | 1p34.2 |
Chromosome id | chr1 |
Chromosome position | 40773839 |
Reported gene | NFYC |
Mapped gene | NFYC - KCNQ4 |
Upstream gene id | 4802 |
Downstream gene id | 9132 |
SNP gene ids | |
Upstream gene distance | 2236 |
Downstream gene distance | 10173 |
SNP risk allele | rs4660456-? |
SNPs | rs4660456 |
Merged | 0 |
SNP id current | 4660456 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [874956] |
CNV | N |
Mapped trait | platelet count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004309 |
Study accession | GCST001061 |