SNP Detail For rs4657178
1.Mapping Information
Human SNP ID rs4657178
Human chromosome chr1
Human SNP position 162240820
Pig chromosome chr4
Pig SNP position 96148226
2.Annotation Information
PubMed ID19305409
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19305409
StudyCommon variants at ten loci modulate the QT interval duration in the QTSCD Study.
Disease/TraitQT interval
Initial sample15,842 European ancestry individuals
Replication sampleup to 13,602 individuals
Region1q23.3
Chromosome idchr1
Chromosome position162240820
Reported geneNOS1AP
Mapped geneNOS1AP
Upstream gene id
Downstream gene id
SNP gene ids9722
Upstream gene distance
Downstream gene distance
SNP risk allelers4657178-T
SNPsrs4657178
Merged0
SNP id current4657178
Contextintron_variant
Intergenic0
Allele frequency0.33
P value7E-33
Pvalue mlog32.1549019599857
P value text
Or beta2.19
%95 Ci[1.76-2.62] ms increase
PlatformAffymetrix, Illumina [2557000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST000364