Human SNP ID | rs4657178 |
---|---|
Human chromosome | chr1 |
Human SNP position | 162240820 |
Pig chromosome | chr4 |
Pig SNP position | 96148226 |
PubMed ID | 19305409 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19305409 |
Study | Common variants at ten loci modulate the QT interval duration in the QTSCD Study. |
Disease/Trait | QT interval |
Initial sample | 15,842 European ancestry individuals |
Replication sample | up to 13,602 individuals |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 162240820 |
Reported gene | NOS1AP |
Mapped gene | NOS1AP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9722 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4657178-T |
SNPs | rs4657178 |
Merged | 0 |
SNP id current | 4657178 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.33 |
P value | 7E-33 |
Pvalue mlog | 32.1549019599857 |
P value text | |
Or beta | 2.19 |
%95 Ci | [1.76-2.62] ms increase |
Platform | Affymetrix, Illumina [2557000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST000364 |