SNP Detail For rs4655303
1.Mapping Information
Human SNP ID rs4655303
Human chromosome chr1
Human SNP position 213661300
Pig chromosome chr9
Pig SNP position 142682612
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (5-HIAA)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region1q32.3
Chromosome idchr1
Chromosome position213661300
Reported geneintergenic
Mapped geneLOC105372910 - LOC105372912
Upstream gene id105372910
Downstream gene id105372912
SNP gene ids
Upstream gene distance82420
Downstream gene distance70123
SNP risk allelers4655303-T
SNPsrs4655303
Merged0
SNP id current4655303
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.2187
%95 Ciunit increase
PlatformIllumina [5767231] (imputed)
CNVN
Mapped trait5-HIAA measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005132
Study accessionGCST001820