Human SNP ID | rs46522 |
---|---|
Human chromosome | chr17 |
Human SNP position | 48911235 |
Pig chromosome | chr12 |
Pig SNP position | 25080957 |
PubMed ID | 21378990 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21378990 |
Study | Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease. |
Disease/Trait | Coronary heart disease |
Initial sample | 22,233 European ancestry cases, 64,762 European ancestry controls |
Replication sample | 56,682 European ancestry cases and controls |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 48911235 |
Reported gene | SNF8, GIP, UBE2Z, ATP5G1 |
Mapped gene | UBE2Z |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 65264 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs46522-T |
SNPs | rs46522 |
Merged | 0 |
SNP id current | 46522 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.53 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 1.06 |
%95 Ci | [1.04-1.08] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000998 |