SNP Detail For rs46522
1.Mapping Information
Human SNP ID rs46522
Human chromosome chr17
Human SNP position 48911235
Pig chromosome chr12
Pig SNP position 25080957
2.Annotation Information
PubMed ID21378990
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378990
StudyLarge-scale association analysis identifies 13 new susceptibility loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample22,233 European ancestry cases, 64,762 European ancestry controls
Replication sample56,682 European ancestry cases and controls
Region17q21.32
Chromosome idchr17
Chromosome position48911235
Reported geneSNF8, GIP, UBE2Z, ATP5G1
Mapped geneUBE2Z
Upstream gene id
Downstream gene id
SNP gene ids65264
Upstream gene distance
Downstream gene distance
SNP risk allelers46522-T
SNPsrs46522
Merged0
SNP id current46522
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.53
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.06
%95 Ci[1.04-1.08]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000998