SNP Detail For rs4642619
1.Mapping Information
Human SNP ID rs4642619
Human chromosome chr8
Human SNP position 110475239
Pig chromosome chr4
Pig SNP position 29372502
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region8q23.2
Chromosome idchr8
Chromosome position110475239
Reported geneNR
Mapped geneKCNV1 - LOC101927459
Upstream gene id27012
Downstream gene id101927459
SNP gene ids
Upstream gene distance499505
Downstream gene distance462451
SNP risk allelers4642619-A
SNPsrs4642619
Merged
SNP id current4642619
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000000008
Pvalue mlog10.096910013008
P value text
Or beta1.09
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048