Human SNP ID | rs4638315 |
---|---|
Human chromosome | chr11 |
Human SNP position | 69270356 |
Pig chromosome | chr2 |
Pig SNP position | 2593845 |
PubMed ID | 25758998 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25758998 |
Study | Genome-wide genetic investigation of serological measures of common infections. |
Disease/Trait | Antibody level in response to infection |
Initial sample | 1,932 Mexican-American individuals |
Replication sample | NA |
Region | 11q13.3 |
Chromosome id | chr11 |
Chromosome position | 69270356 |
Reported gene | MYEOV |
Mapped gene | LOC105369368 - LOC105369369 |
Upstream gene id | 105369368 |
Downstream gene id | 105369369 |
SNP gene ids | |
Upstream gene distance | 19175 |
Downstream gene distance | 2726 |
SNP risk allele | rs4638315-A |
SNPs | rs4638315 |
Merged | 0 |
SNP id current | 4638315 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.29 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (All herpes viruses) |
Or beta | 0.22 |
%95 Ci | [NR] unit increase |
Platform | Illumina [944565] |
CNV | N |
Mapped trait | seropositivity measurement, herpes virus seropositivity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007034, http://www.ebi.ac.uk/efo/EFO_0007036 |
Study accession | GCST002804 |