Human SNP ID | rs4625043 |
---|---|
Human chromosome | chr8 |
Human SNP position | 24675680 |
Pig chromosome | chr14 |
Pig SNP position | 9839436 |
PubMed ID | 26421299 |
---|---|
Journal | Biomed Res Int |
Link | www.ncbi.nlm.nih.gov/pubmed/26421299 |
Study | Genetic Interactions Explain Variance in Cingulate Amyloid Burden: An AV-45 PET Genome-Wide Association and Interaction Study in the ADNI Cohort. |
Disease/Trait | Cingulate cortical amyloid beta load |
Initial sample | 215 European ancestry early mild cognitive impairment cases, 152 European ancestry late mild cognitive impairment cases, 45 European ancestry Alzheimer disease cases, 190 European ancestry controls |
Replication sample | NA |
Region | 8p21.2 |
Chromosome id | chr8 |
Chromosome position | 24675680 |
Reported gene | ADAM7 |
Mapped gene | LOC101929294 - LOC105379329 |
Upstream gene id | 101929294 |
Downstream gene id | 105379329 |
SNP gene ids | |
Upstream gene distance | 127062 |
Downstream gene distance | 208408 |
SNP risk allele | rs4625043-? |
SNPs | rs4625043 |
Merged | |
SNP id current | 4625043 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [582718] |
CNV | N |
Mapped trait | amyloid-beta measurement, cingulate cortex measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005194, http://www.ebi.ac.uk/efo/EFO_0007738 |
Study accession | GCST003113 |