SNP Detail For rs4625043
1.Mapping Information
Human SNP ID rs4625043
Human chromosome chr8
Human SNP position 24675680
Pig chromosome chr14
Pig SNP position 9839436
2.Annotation Information
PubMed ID26421299
JournalBiomed Res Int
Linkwww.ncbi.nlm.nih.gov/pubmed/26421299
StudyGenetic Interactions Explain Variance in Cingulate Amyloid Burden: An AV-45 PET Genome-Wide Association and Interaction Study in the ADNI Cohort.
Disease/TraitCingulate cortical amyloid beta load
Initial sample215 European ancestry early mild cognitive impairment cases, 152 European ancestry late mild cognitive impairment cases, 45 European ancestry Alzheimer disease cases, 190 European ancestry controls
Replication sampleNA
Region8p21.2
Chromosome idchr8
Chromosome position24675680
Reported geneADAM7
Mapped geneLOC101929294 - LOC105379329
Upstream gene id101929294
Downstream gene id105379329
SNP gene ids
Upstream gene distance127062
Downstream gene distance208408
SNP risk allelers4625043-?
SNPsrs4625043
Merged
SNP id current4625043
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [582718]
CNVN
Mapped traitamyloid-beta measurement, cingulate cortex measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005194, http://www.ebi.ac.uk/efo/EFO_0007738
Study accessionGCST003113