SNP Detail For rs4624519
1.Mapping Information
Human SNP ID rs4624519
Human chromosome chr3
Human SNP position 36821489
Pig chromosome chr13
Pig SNP position 23846458
2.Annotation Information
PubMed ID21926974
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21926974
StudyGenome-wide association study identifies five new schizophrenia loci.
Disease/TraitSchizophrenia
Initial sample9,394 European ancestry cases, 12,462 European ancestry controls
Replication sample8,442 European ancestry cases, 21,397 European ancestry controls
Region3p22.2
Chromosome idchr3
Chromosome position36821489
Reported geneNR
Mapped geneLOC105377031
Upstream gene id
Downstream gene id
SNP gene ids105377031
Upstream gene distance
Downstream gene distance
SNP risk allelers4624519-?
SNPsrs4624519
Merged0
SNP id current4624519
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.09
%95 Ci[1.05-1.12]
PlatformAffymetrix, Illumina [1252901] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST001242