Human SNP ID | rs4617927 |
---|---|
Human chromosome | chr17 |
Human SNP position | 55278765 |
Pig chromosome | chr12 |
Pig SNP position | 32268081 |
PubMed ID | 24236485 |
---|---|
Journal | Pharmacogenomics |
Link | www.ncbi.nlm.nih.gov/pubmed/24236485 |
Study | Genome-wide association study in NSAID-induced acute urticaria/angioedema in Spanish and Han Chinese populations. |
Disease/Trait | Acute urticaria and angioedema (non-steroidal anti-inflammatory drug-induced) |
Initial sample | 112 European ancestry cases, 124 European ancestry controls, 120 Han Chinese ancestry cases, 101 Han Chinese ancestry controls |
Replication sample | NA |
Region | 17q22 |
Chromosome id | chr17 |
Chromosome position | 55278765 |
Reported gene | HLF |
Mapped gene | HLF |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3131 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4617927-? |
SNPs | rs4617927 |
Merged | 0 |
SNP id current | 4617927 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [up to 644046] |
CNV | N |
Mapped trait | urticaria, response to non-steroidal anti-inflammatory, angioedema |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005531, http://www.ebi.ac.uk/efo/EFO_0005533, http://www.ebi.ac.uk/efo/EFO_0005532 |
Study accession | GCST002263 |