SNP Detail For rs461409
1.Mapping Information
Human SNP ID rs461409
Human chromosome chr5
Human SNP position 98594262
Pig chromosome chr2
Pig SNP position 108786996
2.Annotation Information
PubMed ID24236485
JournalPharmacogenomics
Linkwww.ncbi.nlm.nih.gov/pubmed/24236485
StudyGenome-wide association study in NSAID-induced acute urticaria/angioedema in Spanish and Han Chinese populations.
Disease/TraitAcute urticaria and angioedema (non-steroidal anti-inflammatory drug-induced)
Initial sample112 European ancestry cases, 124 European ancestry controls, 120 Han Chinese ancestry cases, 101 Han Chinese ancestry controls
Replication sampleNA
Region5q15
Chromosome idchr5
Chromosome position98594262
Reported geneRGMB, AKAP9
Mapped geneKRT8P32 - DDX18P4
Upstream gene id100289133
Downstream gene id402222
SNP gene ids
Upstream gene distance200652
Downstream gene distance85040
SNP risk allelers461409-?
SNPsrs461409
Merged0
SNP id current461409
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta
%95 Ci
PlatformAffymetrix [up to 644046]
CNVN
Mapped traiturticaria, response to non-steroidal anti-inflammatory, angioedema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005531, http://www.ebi.ac.uk/efo/EFO_0005533, http://www.ebi.ac.uk/efo/EFO_0005532
Study accessionGCST002263