SNP Detail For rs4601609
1.Mapping Information
Human SNP ID rs4601609
Human chromosome chr1
Human SNP position 58859954
Pig chromosome chr6
Pig SNP position 141157939
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region1p32.1
Chromosome idchr1
Chromosome position58859954
Reported geneJUN
Mapped geneLINC01135
Upstream gene id
Downstream gene id
SNP gene ids100131060
Upstream gene distance
Downstream gene distance
SNP risk allelers4601609-?
SNPsrs4601609
Merged0
SNP id current4601609
Contextintron_variant
Intergenic0
Allele frequency0.04517
P value0.000005
Pvalue mlog5.30102999566398
P value text(PRM)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477