Human SNP ID | rs459193 |
---|---|
Human chromosome | chr5 |
Human SNP position | 56510924 |
Pig chromosome | chr16 |
Pig SNP position | 37744864 |
PubMed ID | 25673412 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 56510924 |
Reported gene | ANKRD55 |
Mapped gene | RPL26P19 - LOC101928448 |
Upstream gene id | 441073 |
Downstream gene id | 101928448 |
SNP gene ids | |
Upstream gene distance | 5810 |
Downstream gene distance | 470 |
SNP risk allele | rs459193-A |
SNPs | rs459193 |
Merged | 0 |
SNP id current | 459193 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2663 |
P value | 0.000000007 |
Pvalue mlog | 8.15490195998574 |
P value text | (EA, men) |
Or beta | 0.0325 |
%95 Ci | [0.022-0.043] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 56510924 |
Reported gene | ANKRD55 |
Mapped gene | RPL26P19 - LOC101928448 |
Upstream gene id | 441073 |
Downstream gene id | 101928448 |
SNP gene ids | |
Upstream gene distance | 5810 |
Downstream gene distance | 470 |
SNP risk allele | rs459193-A |
SNPs | rs459193 |
Merged | 0 |
SNP id current | 459193 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2645 |
P value | 0.00000000002 |
Pvalue mlog | 10.698970004336 |
P value text | (EA) |
Or beta | 0.0259 |
%95 Ci | [0.018-0.033] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 56510924 |
Reported gene | ANKRD55 |
Mapped gene | RPL26P19 - LOC101928448 |
Upstream gene id | 441073 |
Downstream gene id | 101928448 |
SNP gene ids | |
Upstream gene distance | 5810 |
Downstream gene distance | 470 |
SNP risk allele | rs459193-A |
SNPs | rs459193 |
Merged | 0 |
SNP id current | 459193 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2769 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | (men) |
Or beta | 0.0315 |
%95 Ci | [0.021-0.042] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 56510924 |
Reported gene | ANKRD55 |
Mapped gene | RPL26P19 - LOC101928448 |
Upstream gene id | 441073 |
Downstream gene id | 101928448 |
SNP gene ids | |
Upstream gene distance | 5810 |
Downstream gene distance | 470 |
SNP risk allele | rs459193-A |
SNPs | rs459193 |
Merged | 0 |
SNP id current | 459193 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2779 |
P value | 0.000000000005 |
Pvalue mlog | 11.3010299956639 |
P value text | |
Or beta | 0.0255 |
%95 Ci | [0.018-0.033] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |