Human SNP ID | rs4581716 |
---|---|
Human chromosome | chr16 |
Human SNP position | 7408134 |
Pig chromosome | chr3 |
Pig SNP position | 36181061 |
PubMed ID | 25233373 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25233373 |
Study | Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 Loci. |
Disease/Trait | Myopia |
Initial sample | 3,923 European ancestry cases, 11,696 European ancestry controls |
Replication sample | 1,410 European ancestry cases, 2,921 cases, 3,171 European ancestry controls, 998 controls |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 7408134 |
Reported gene | RBFOX1 |
Mapped gene | RBFOX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54715 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4581716-? |
SNPs | rs4581716 |
Merged | 0 |
SNP id current | 4581716 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [up to 3397980] (imputed) |
CNV | N |
Mapped trait | Myopia |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0000545 |
Study accession | GCST002615 |