Human SNP ID | rs457287 |
---|---|
Human chromosome | chr9 |
Human SNP position | 4834394 |
Pig chromosome | chr1 |
Pig SNP position | 243010579 |
PubMed ID | 23263863 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263863 |
Study | GWAS of blood cell traits identifies novel associated loci and epistatic interactions in Caucasian and African-American children. |
Disease/Trait | Platelet count |
Initial sample | 7,943 African American children, 6,234 European ancestry children |
Replication sample | NA |
Region | 9p24.1 |
Chromosome id | chr9 |
Chromosome position | 4834394 |
Reported gene | RCL1 |
Mapped gene | RCL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10171 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs457287-A |
SNPs | rs457287 |
Merged | 0 |
SNP id current | 457287 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 5.987 |
%95 Ci | [3.55-8.42] unit decrease |
Platform | Illumina [544917] |
CNV | N |
Mapped trait | platelet count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004309 |
Study accession | GCST001783 |