SNP Detail For rs457287
1.Mapping Information
Human SNP ID rs457287
Human chromosome chr9
Human SNP position 4834394
Pig chromosome chr1
Pig SNP position 243010579
2.Annotation Information
PubMed ID23263863
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23263863
StudyGWAS of blood cell traits identifies novel associated loci and epistatic interactions in Caucasian and African-American children.
Disease/TraitPlatelet count
Initial sample7,943 African American children, 6,234 European ancestry children
Replication sampleNA
Region9p24.1
Chromosome idchr9
Chromosome position4834394
Reported geneRCL1
Mapped geneRCL1
Upstream gene id
Downstream gene id
SNP gene ids10171
Upstream gene distance
Downstream gene distance
SNP risk allelers457287-A
SNPsrs457287
Merged0
SNP id current457287
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta5.987
%95 Ci[3.55-8.42] unit decrease
PlatformIllumina [544917]
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001783