SNP Detail For rs4569005
1.Mapping Information
Human SNP ID rs4569005
Human chromosome chr11
Human SNP position 21037185
Pig chromosome chr2
Pig SNP position 41683034
2.Annotation Information
PubMed ID22379998
JournalPharmacogenomics
Linkwww.ncbi.nlm.nih.gov/pubmed/22379998
StudyGenome-wide mapping for clinically relevant predictors of lamotrigine- and phenytoin-induced hypersensitivity reactions.
Disease/TraitAdverse response to lamotrigine and phenytoin
Initial sample34 European ancestry lamotrigine-induced hypersensitivity cases, 42 European ancestry phenytoin-induced hypersensitivity cases, 1,296 European ancestry controls
Replication sampleNA
Region11p15.1
Chromosome idchr11
Chromosome position21037185
Reported geneNELL1
Mapped geneNELL1
Upstream gene id
Downstream gene id
SNP gene ids4745
Upstream gene distance
Downstream gene distance
SNP risk allelers4569005-?
SNPsrs4569005
Merged0
SNP id current4569005
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(Total LTG and PHT)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to anticonvulsant
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036277
Study accessionGCST001431