Human SNP ID | rs4559365 |
---|---|
Human chromosome | chrX |
Human SNP position | 122833506 |
Pig chromosome | chrX |
Pig SNP position | 115306641 |
PubMed ID | 23319000 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23319000 |
Study | Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. |
Disease/Trait | Metabolite levels (MHPG) |
Initial sample | up to 398 European ancestry individuals |
Replication sample | NA |
Region | Xq25 |
Chromosome id | chrX |
Chromosome position | 122833506 |
Reported gene | intergenic |
Mapped gene | RPL3P12 - MRRFP1 |
Upstream gene id | 100131358 |
Downstream gene id | 286423 |
SNP gene ids | |
Upstream gene distance | 293990 |
Downstream gene distance | 282601 |
SNP risk allele | rs4559365-A |
SNPs | rs4559365 |
Merged | 0 |
SNP id current | 4559365 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.2955 |
%95 Ci | unit decrease |
Platform | Illumina [5767231] (imputed) |
CNV | N |
Mapped trait | MHPG measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005133 |
Study accession | GCST001822 |