SNP Detail For rs4559365
1.Mapping Information
Human SNP ID rs4559365
Human chromosome chrX
Human SNP position 122833506
Pig chromosome chrX
Pig SNP position 115306641
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (MHPG)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
RegionXq25
Chromosome idchrX
Chromosome position122833506
Reported geneintergenic
Mapped geneRPL3P12 - MRRFP1
Upstream gene id100131358
Downstream gene id286423
SNP gene ids
Upstream gene distance293990
Downstream gene distance282601
SNP risk allelers4559365-A
SNPsrs4559365
Merged0
SNP id current4559365
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.2955
%95 Ciunit decrease
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitMHPG measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005133
Study accessionGCST001822