Human SNP ID | rs4557101 |
---|---|
Human chromosome | chr3 |
Human SNP position | 73491467 |
Pig chromosome | chr13 |
Pig SNP position | 60527317 |
PubMed ID | 23166209 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23166209 |
Study | Impact of ancestry and common genetic variants on QT interval in African Americans. |
Disease/Trait | QT interval |
Initial sample | 13,105 African American individuals |
Replication sample | NA |
Region | 3p13 |
Chromosome id | chr3 |
Chromosome position | 73491467 |
Reported gene | NR |
Mapped gene | PDZRN3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23024 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4557101-C |
SNPs | rs4557101 |
Merged | 0 |
SNP id current | 4557101 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.22 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.72 |
%95 Ci | [0.99-2.45] unit increase |
Platform | Affymetrix, Illumina [2800000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001746 |