SNP Detail For rs4557101
1.Mapping Information
Human SNP ID rs4557101
Human chromosome chr3
Human SNP position 73491467
Pig chromosome chr13
Pig SNP position 60527317
2.Annotation Information
PubMed ID23166209
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23166209
StudyImpact of ancestry and common genetic variants on QT interval in African Americans.
Disease/TraitQT interval
Initial sample13,105 African American individuals
Replication sampleNA
Region3p13
Chromosome idchr3
Chromosome position73491467
Reported geneNR
Mapped genePDZRN3
Upstream gene id
Downstream gene id
SNP gene ids23024
Upstream gene distance
Downstream gene distance
SNP risk allelers4557101-C
SNPsrs4557101
Merged0
SNP id current4557101
Contextintron_variant
Intergenic0
Allele frequency0.22
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.72
%95 Ci[0.99-2.45] unit increase
PlatformAffymetrix, Illumina [2800000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST001746