SNP Detail For rs4542491
1.Mapping Information
Human SNP ID rs4542491
Human chromosome chr12
Human SNP position 82143065
Pig chromosome chr5
Pig SNP position 104270543
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region12q21.31
Chromosome idchr12
Chromosome position82143065
Reported geneIntergenic
Mapped geneLOC105369873
Upstream gene id
Downstream gene id
SNP gene ids105369873
Upstream gene distance
Downstream gene distance
SNP risk allelers4542491-C
SNPsrs4542491
Merged0
SNP id current4542491
Contextintergenic_variant
Intergenic0
Allele frequency1
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta2.107
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262