Human SNP ID | rs4502542 |
---|---|
Human chromosome | chr3 |
Human SNP position | 59935294 |
Pig chromosome | chr13 |
Pig SNP position | 45751517 |
PubMed ID | 22760553 |
---|---|
Journal | Transl Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22760553 |
Study | Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D. |
Disease/Trait | Response to citalopram treatment |
Initial sample | 1,392 European ancestry depression cases, 264 African American depression cases, 106 depression cases |
Replication sample | NA |
Region | 3p14.2 |
Chromosome id | chr3 |
Chromosome position | 59935294 |
Reported gene | FHIT |
Mapped gene | FHIT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2272 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4502542-T |
SNPs | rs4502542 |
Merged | 0 |
SNP id current | 4502542 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.017 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (EA + AA - GSE) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [421789] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST001591 |