SNP Detail For rs4459386
1.Mapping Information
Human SNP ID rs4459386
Human chromosome chr12
Human SNP position 50201164
Pig chromosome chr5
Pig SNP position 16592386
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region12q13.12
Chromosome idchr12
Chromosome position50201164
Reported geneNR
Mapped geneLIMA1
Upstream gene id
Downstream gene id
SNP gene ids51474
Upstream gene distance
Downstream gene distance
SNP risk allelers4459386-A
SNPsrs4459386
Merged
SNP id current4459386
Context5_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.05
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048