SNP Detail For rs4457053
1.Mapping Information
Human SNP ID rs4457053
Human chromosome chr5
Human SNP position 77129124
Pig chromosome chr2
Pig SNP position 87601100
2.Annotation Information
PubMed ID20581827
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20581827
StudyTwelve type 2 diabetes susceptibility loci identified through large-scale association analysis.
Disease/TraitType 2 diabetes
Initial sample8,130 European ancestry cases, 38,987 European ancestry controls
Replication sampleUp to 34,412 European ancestry cases, 59,925 European ancestry controls
Region5q13.3
Chromosome idchr5
Chromosome position77129124
Reported geneZBED3
Mapped geneZBED3-AS1, LOC105379044
Upstream gene id
Downstream gene id
SNP gene ids728723, 105379044
Upstream gene distance
Downstream gene distance
SNP risk allelers4457053-G
SNPsrs4457053
Merged0
SNP id current4457053
Contextintron_variant
Intergenic0
Allele frequency
P value0.000000000003
Pvalue mlog11.5228787452803
P value text
Or beta1.08
%95 Ci[1.06-1.11]
PlatformAffymetrix, Illumina [2426886] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST000712