Human SNP ID | rs4434872 |
---|---|
Human chromosome | chr1 |
Human SNP position | 153801800 |
Pig chromosome | chr4 |
Pig SNP position | 104770528 |
PubMed ID | 20585324 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/20585324 |
Study | Genome-wide association study of conduct disorder symptomatology. |
Disease/Trait | Conduct disorder (symptom count) |
Initial sample | 872 European, African American and other ancestry substance dependence cases, 3,091 European, African American and other ancestry controls |
Replication sample | NA |
Region | 1q21.3 |
Chromosome id | chr1 |
Chromosome position | 153801800 |
Reported gene | LOC343052 |
Mapped gene | LOC105371448 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371448 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4434872-T |
SNPs | rs4434872 |
Merged | 0 |
SNP id current | 4434872 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | 0.263 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.08 |
%95 Ci | [NR] unit increase |
Platform | Illumina [948658] |
CNV | N |
Mapped trait | conduct disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004216 |
Study accession | GCST000713 |