SNP Detail For rs4424296
1.Mapping Information
Human SNP ID rs4424296
Human chromosome chr8
Human SNP position 119001037
Pig chromosome chr4
Pig SNP position 20877713
2.Annotation Information
PubMed ID24249740
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24249740
StudyMultistage genome-wide association meta-analyses identified two new loci for bone mineral density.
Disease/TraitBone mineral density
Initial sample5,833 European ancestry females, 2,639 European ancestry males, 784 Han Chinese ancestry females, 763 Han Chinese ancestry males, 712 African American females, 409 Hispanic females
Replication sample7,010 European ancestry females, 3,772 European ancestry males, 2,980 East Asian ancestry females, 2,159 East Asian ancestry males
Region8q24.12
Chromosome idchr8
Chromosome position119001037
Reported geneTNFRSF11B
Mapped geneCOLEC10
Upstream gene id
Downstream gene id
SNP gene ids10584
Upstream gene distance
Downstream gene distance
SNP risk allelers4424296-?
SNPsrs4424296
Merged0
SNP id current4424296
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text(spine)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [5842825] (imputed)
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST002276