SNP Detail For rs4415084
1.Mapping Information
Human SNP ID rs4415084
Human chromosome chr5
Human SNP position 44662413
Pig chromosome chr16
Pig SNP position 30530880
2.Annotation Information
PubMed ID21263130
JournalJ Natl Cancer Inst
Linkwww.ncbi.nlm.nih.gov/pubmed/21263130
StudyNovel breast cancer susceptibility locus at 9q31.2: results of a genome-wide association study.
Disease/TraitBreast cancer
Initial sample2,839 European ancestry cases, 3,507 European ancestry controls
Replication sample9,041 European ancestry cases, 8,980 European ancestry controls
Region5p12
Chromosome idchr5
Chromosome position44662413
Reported geneintergenic
Mapped geneLOC102723839
Upstream gene id
Downstream gene id
SNP gene ids102723839
Upstream gene distance
Downstream gene distance
SNP risk allelers4415084-T
SNPsrs4415084
Merged0
SNP id current4415084
Contextintergenic_variant
Intergenic0
Allele frequency0.42
P value0.00000000008
Pvalue mlog10.096910013008
P value text
Or beta1.17
%95 Ci[1.11-1.22]
PlatformIllumina [~ 296114]
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST000952