Human SNP ID | rs4395360 |
---|---|
Human chromosome | chr3 |
Human SNP position | 157600468 |
Pig chromosome | chr13 |
Pig SNP position | 105597377 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 3q25.32 |
Chromosome id | chr3 |
Chromosome position | 157600468 |
Reported gene | C3orf55 |
Mapped gene | PQLC2L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 152078 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4395360-C |
SNPs | rs4395360 |
Merged | 0 |
SNP id current | 4395360 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.383 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (EA) |
Or beta | 0.017 |
%95 Ci | [0.0099-0.0247] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 3q25.32 |
Chromosome id | chr3 |
Chromosome position | 157600468 |
Reported gene | C3orf55 |
Mapped gene | PQLC2L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 152078 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4395360-C |
SNPs | rs4395360 |
Merged | 0 |
SNP id current | 4395360 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.387 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.016 |
%95 Ci | [0.0093-0.0235] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |