SNP Detail For rs438475
1.Mapping Information
Human SNP ID rs438475
Human chromosome chr6
Human SNP position 32218468
Pig chromosome chr7
Pig SNP position 28070338
2.Annotation Information
PubMed ID26503763
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/26503763
StudyGenome-wide association study identifies SESTD1 as a novel risk gene for lithium-responsive bipolar disorder.
Disease/TraitObjective response to lithium treatment in bipolar disorder
Initial sample323 European ancestry responder cases, 853 European ancestry non-responder cases
Replication sampleNA
Region6p21.32
Chromosome idchr6
Chromosome position32218468
Reported geneNOTCH4
Mapped geneNOTCH4
Upstream gene id
Downstream gene id
SNP gene ids4855
Upstream gene distance
Downstream gene distance
SNP risk allelers438475-A
SNPsrs438475
Merged0
SNP id current438475
Contextintron_variant
Intergenic0
Allele frequency0.12
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta2.04
%95 Ci[NR]
PlatformAffymetrix, Illumina [> 8000000] (imputed)
CNVN
Mapped traitbipolar disorder, response to lithium ion
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://purl.obolibrary.org/obo/GO_0010226
Study accessionGCST003161