Human SNP ID | rs4380028 |
---|---|
Human chromosome | chr15 |
Human SNP position | 78818751 |
Pig chromosome | chr7 |
Pig SNP position | 53536237 |
PubMed ID | 21378988 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21378988 |
Study | A genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease. |
Disease/Trait | Coronary heart disease |
Initial sample | 8,424 European ancestry cases, 7,268 European ancestry controls, 6,996 South Asian ancestry cases, 7,794 South Asian ancestry controls |
Replication sample | 18,049 European ancestry cases, 16,357 European ancestry controls, 3,359 South Asian ancestry cases, 2,828 South Asian ancestry controls |
Region | 15q25.1 |
Chromosome id | chr15 |
Chromosome position | 78818751 |
Reported gene | ADAMTS7, MORF4L1 |
Mapped gene | ADAMTS7 - TRK-CTT1-2 |
Upstream gene id | 11173 |
Downstream gene id | 100189013 |
SNP gene ids | |
Upstream gene distance | 7287 |
Downstream gene distance | 41811 |
SNP risk allele | rs4380028-C |
SNPs | rs4380028 |
Merged | 0 |
SNP id current | 4380028 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.65 |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.05-1.10] |
Platform | Illumina [574919] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000999 |