SNP Detail For rs4374383
1.Mapping Information
Human SNP ID rs4374383
Human chromosome chr2
Human SNP position 112013193
Pig chromosome chr3
Pig SNP position 46158466
2.Annotation Information
PubMed ID22841784
JournalGastroenterology
Linkwww.ncbi.nlm.nih.gov/pubmed/22841784
StudyGenome-wide association study identifies variants associated with progression of liver fibrosis from HCV infection.
Disease/TraitHepatitis C induced liver fibrosis
Initial sample1,161 European ancestry HCV-infected individuals
Replication sample1,181 European ancestry HCV-infected individuals
Region2q13
Chromosome idchr2
Chromosome position112013193
Reported geneMERTK
Mapped geneMERTK
Upstream gene id
Downstream gene id
SNP gene ids10461
Upstream gene distance
Downstream gene distance
SNP risk allelers4374383-A
SNPsrs4374383
Merged0
SNP id current4374383
Contextintron_variant
Intergenic0
Allele frequency0.42
P value0.000000001
Pvalue mlog9
P value text(Duration F0-1/F3-4, transfused)
Or beta
%95 Ci
PlatformIllumina [780650] (imputed)
CNVN
Mapped traithepatitis C infection, cirrhosis of liver
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003047, http://www.ebi.ac.uk/efo/EFO_0001422
Study accessionGCST001623