SNP Detail For rs4368253
1.Mapping Information
Human SNP ID rs4368253
Human chromosome chr18
Human SNP position 59955055
Pig chromosome chr1
Pig SNP position 178819958
2.Annotation Information
PubMed ID23770605
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23770605
StudyGenome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia.
Disease/TraitChronic lymphocytic leukemia
Initial sample2,179 European ancestry cases, 6,221 European ancestry controls
Replication sample1,709 European ancestry cases, 6,318 European ancestry controls
Region18q21.32
Chromosome idchr18
Chromosome position59955055
Reported genePMAIP1
Mapped geneLOC105372151 - NFE2L3P1
Upstream gene id105372151
Downstream gene id642996
SNP gene ids
Upstream gene distance3749
Downstream gene distance12753
SNP risk allelers4368253-C
SNPsrs4368253
Merged0
SNP id current4368253
Contextintergenic_variant
Intergenic1
Allele frequency0.69
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta1.19
%95 Ci[1.12-1.27]
PlatformIllumina [549934]
CNVN
Mapped traitchronic lymphocytic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000095
Study accessionGCST002073