Human SNP ID | rs4368253 |
---|---|
Human chromosome | chr18 |
Human SNP position | 59955055 |
Pig chromosome | chr1 |
Pig SNP position | 178819958 |
PubMed ID | 23770605 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23770605 |
Study | Genome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia. |
Disease/Trait | Chronic lymphocytic leukemia |
Initial sample | 2,179 European ancestry cases, 6,221 European ancestry controls |
Replication sample | 1,709 European ancestry cases, 6,318 European ancestry controls |
Region | 18q21.32 |
Chromosome id | chr18 |
Chromosome position | 59955055 |
Reported gene | PMAIP1 |
Mapped gene | LOC105372151 - NFE2L3P1 |
Upstream gene id | 105372151 |
Downstream gene id | 642996 |
SNP gene ids | |
Upstream gene distance | 3749 |
Downstream gene distance | 12753 |
SNP risk allele | rs4368253-C |
SNPs | rs4368253 |
Merged | 0 |
SNP id current | 4368253 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.69 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 1.19 |
%95 Ci | [1.12-1.27] |
Platform | Illumina [549934] |
CNV | N |
Mapped trait | chronic lymphocytic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000095 |
Study accession | GCST002073 |