Human SNP ID | rs4363506 |
---|---|
Human chromosome | chr10 |
Human SNP position | 127476239 |
Pig chromosome | chr14 |
Pig SNP position | 148018077 |
PubMed ID | 17362836 |
---|---|
Journal | Lancet Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/17362836 |
Study | Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 276 European ancestry cases, 271 European ancestry controls |
Replication sample | NA |
Region | 10q26.2 |
Chromosome id | chr10 |
Chromosome position | 127476239 |
Reported gene | intergenic |
Mapped gene | DOCK1 - NPS |
Upstream gene id | 1793 |
Downstream gene id | 594857 |
SNP gene ids | |
Upstream gene distance | 23722 |
Downstream gene distance | 73110 |
SNP risk allele | rs4363506-? |
SNPs | rs4363506 |
Merged | 0 |
SNP id current | 4363506 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 1.9 |
%95 Ci | [1.50-2.40] |
Platform | Illumina [549062] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST000013 |