SNP Detail For rs435746
1.Mapping Information
Human SNP ID rs435746
Human chromosome chr16
Human SNP position 77882294
Pig chromosome chr6
Pig SNP position 9979428
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region16q23.1
Chromosome idchr16
Chromosome position77882294
Reported geneNR
Mapped geneVAT1L
Upstream gene id
Downstream gene id
SNP gene ids57687
Upstream gene distance
Downstream gene distance
SNP risk allelers435746-?
SNPsrs435746
Merged0
SNP id current435746
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.283
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821