Human SNP ID | rs435746 |
---|---|
Human chromosome | chr16 |
Human SNP position | 77882294 |
Pig chromosome | chr6 |
Pig SNP position | 9979428 |
PubMed ID | 20889312 |
---|---|
Journal | Schizophr Res |
Link | www.ncbi.nlm.nih.gov/pubmed/20889312 |
Study | A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls |
Replication sample | NA |
Region | 16q23.1 |
Chromosome id | chr16 |
Chromosome position | 77882294 |
Reported gene | NR |
Mapped gene | VAT1L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57687 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs435746-? |
SNPs | rs435746 |
Merged | 0 |
SNP id current | 435746 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.283 |
%95 Ci | [NR] |
Platform | Affymetrix [722112] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000821 |