Human SNP ID | rs4342585 |
---|---|
Human chromosome | chr8 |
Human SNP position | 73555269 |
Pig chromosome | chr4 |
Pig SNP position | 68017947 |
PubMed ID | 24144296 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24144296 |
Study | Nine loci for ocular axial length identified through genome-wide association studies, including shared loci with refractive error. |
Disease/Trait | Axial length |
Initial sample | 12,531 European ancestry individuals |
Replication sample | 8,216 Asian ancestry individuals |
Region | 8q21.11 |
Chromosome id | chr8 |
Chromosome position | 73555269 |
Reported gene | STAU2 |
Mapped gene | STAU2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 27067 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4342585-C |
SNPs | rs4342585 |
Merged | 0 |
SNP id current | 4342585 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.9826 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.2559 |
%95 Ci | [0.14-0.37] unit decrease |
Platform | Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | axial length measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005318 |
Study accession | GCST002115 |