Human SNP ID | rs433406 |
---|---|
Human chromosome | chr11 |
Human SNP position | 131501125 |
Pig chromosome | chr9 |
Pig SNP position | 64397375 |
PubMed ID | 22633400 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22633400 |
Study | Genome-wide association study identifies candidate genes for male fertility traits in humans. |
Disease/Trait | Male fertility |
Initial sample | 269 Hutterite males |
Replication sample | NA |
Region | 11q25 |
Chromosome id | chr11 |
Chromosome position | 131501125 |
Reported gene | NTM |
Mapped gene | NTM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 50863 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs433406-G |
SNPs | rs433406 |
Merged | 0 |
SNP id current | 433406 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.47 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Birth rate, additive) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [248210] |
CNV | N |
Mapped trait | birth rate, male fertility |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004804, http://www.ebi.ac.uk/efo/EFO_0004803 |
Study accession | GCST001540 |