Human SNP ID | rs4333127 |
---|---|
Human chromosome | chr4 |
Human SNP position | 5928306 |
Pig chromosome | chr8 |
Pig SNP position | 2502966 |
PubMed ID | 23720494 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23720494 |
Study | Genome-wide association study identifies loci affecting blood copper, selenium and zinc. |
Disease/Trait | Blood trace element (Zn levels) |
Initial sample | 2,603 European ancestry individuals |
Replication sample | NA |
Region | 4p16.2 |
Chromosome id | chr4 |
Chromosome position | 5928306 |
Reported gene | CRMP1, FLJ46481 |
Mapped gene | MIR378D1 - C4orf50 |
Upstream gene id | 100616201 |
Downstream gene id | 389197 |
SNP gene ids | |
Upstream gene distance | 4978 |
Downstream gene distance | 28806 |
SNP risk allele | rs4333127-? |
SNPs | rs4333127 |
Merged | 0 |
SNP id current | 4333127 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.218 |
%95 Ci | [0.13-0.31] unit increase |
Platform | Illumina [> 2500000] (imputed) |
CNV | N |
Mapped trait | serum zinc measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005268 |
Study accession | GCST002040 |