SNP Detail For rs4333127
1.Mapping Information
Human SNP ID rs4333127
Human chromosome chr4
Human SNP position 5928306
Pig chromosome chr8
Pig SNP position 2502966
2.Annotation Information
PubMed ID23720494
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23720494
StudyGenome-wide association study identifies loci affecting blood copper, selenium and zinc.
Disease/TraitBlood trace element (Zn levels)
Initial sample2,603 European ancestry individuals
Replication sampleNA
Region4p16.2
Chromosome idchr4
Chromosome position5928306
Reported geneCRMP1, FLJ46481
Mapped geneMIR378D1 - C4orf50
Upstream gene id100616201
Downstream gene id389197
SNP gene ids
Upstream gene distance4978
Downstream gene distance28806
SNP risk allelers4333127-?
SNPsrs4333127
Merged0
SNP id current4333127
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.218
%95 Ci[0.13-0.31] unit increase
PlatformIllumina [> 2500000] (imputed)
CNVN
Mapped traitserum zinc measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005268
Study accessionGCST002040