SNP Detail For rs4315565
1.Mapping Information
Human SNP ID rs4315565
Human chromosome chr2
Human SNP position 69060811
Pig chromosome chr3
Pig SNP position 76793203
2.Annotation Information
PubMed ID21998595
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21998595
StudyIdentification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry.
Disease/TraitHeight
Initial sample20,427 African ancestry individuals
Replication sampleUp to 16,436 African American individuals
Region2p13.3
Chromosome idchr2
Chromosome position69060811
Reported geneANTXR1
Mapped geneANTXR1
Upstream gene id
Downstream gene id
SNP gene ids84168
Upstream gene distance
Downstream gene distance
SNP risk allelers4315565-A
SNPsrs4315565
Merged0
SNP id current4315565
Contextintron_variant
Intergenic0
Allele frequency0.2
P value0.00000001
Pvalue mlog8
P value text
Or beta0.059
%95 Ci[0.039-0.079] unit decrease
PlatformAffymetrix, Illumina [3310998] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001263