SNP Detail For rs4311394
1.Mapping Information
Human SNP ID rs4311394
Human chromosome chr5
Human SNP position 54004832
Pig chromosome chr16
Pig SNP position 35259062
2.Annotation Information
PubMed ID20011104
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20011104
StudyA genome-wide association study reveals variants in ARL15 that influence adiponectin levels.
Disease/TraitAdiponectin levels
Initial sample8,531 European ancestry individuals
Replication sample6,202 European ancestry individuals
Region5q11.2
Chromosome idchr5
Chromosome position54004832
Reported geneARL15
Mapped geneARL15
Upstream gene id
Downstream gene id
SNP gene ids54622
Upstream gene distance
Downstream gene distance
SNP risk allelers4311394-G
SNPsrs4311394
Merged0
SNP id current4311394
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta0.96
%95 Ci[NR] ug/ml increase
PlatformAffymetrix, Illumina [~ 2200000] (imputed)
CNVN
Mapped traitadiponectin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004502
Study accessionGCST000538