Human SNP ID | rs4307059 |
---|---|
Human chromosome | chr5 |
Human SNP position | 25967594 |
Pig chromosome | chr1 |
Pig SNP position | 200805311 |
PubMed ID | 19404256 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/19404256 |
Study | Common genetic variants on 5p14.1 associate with autism spectrum disorders. |
Disease/Trait | Autism |
Initial sample | 3,101 European ancestry individuals from 780 families, 1,204 European ancestry cases, 6,491 European ancestry controls |
Replication sample | 1,390 European ancestry individuals from 447 families, 108 European ancestry cases, 540 European ancestry controls |
Region | 5p14.1 |
Chromosome id | chr5 |
Chromosome position | 25967594 |
Reported gene | CDH10, CDH9 |
Mapped gene | MSNP1 - CDH9 |
Upstream gene id | 4479 |
Downstream gene id | 1007 |
SNP gene ids | |
Upstream gene distance | 54316 |
Downstream gene distance | 913006 |
SNP risk allele | rs4307059-T |
SNPs | rs4307059 |
Merged | 0 |
SNP id current | 4307059 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.61 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | |
Or beta | 1.19 |
%95 Ci | [NR] |
Platform | Illumina [474019] |
CNV | N |
Mapped trait | autism |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003758 |
Study accession | GCST000382 |