SNP Detail For rs4304868
1.Mapping Information
Human SNP ID rs4304868
Human chromosome chr12
Human SNP position 117732104
Pig chromosome chr14
Pig SNP position 37068786
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue adjusted for BMI
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region12q24.23
Chromosome idchr12
Chromosome position117732104
Reported geneKSR2
Mapped geneKSR2
Upstream gene id
Downstream gene id
SNP gene ids283455
Upstream gene distance
Downstream gene distance
SNP risk allelers4304868-A
SNPsrs4304868
Merged0
SNP id current4304868
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.000008
Pvalue mlog5.09691001300805
P value text(overall)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001523