SNP Detail For rs4301033
1.Mapping Information
Human SNP ID rs4301033
Human chromosome chr3
Human SNP position 150324831
Pig chromosome chr13
Pig SNP position 98622755
2.Annotation Information
PubMed ID22479202
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22479202
StudyNovel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals.
Disease/TraitAdiponectin levels
Initial sample29,347 European ancestry individuals
Replication sample10,536 European ancestry individuals
Region3q25.1
Chromosome idchr3
Chromosome position150324831
Reported geneTSC22D2
Mapped geneLINC01214 - TSC22D2
Upstream gene id101928022
Downstream gene id9819
SNP gene ids
Upstream gene distance1084
Downstream gene distance83504
SNP risk allelers4301033-G
SNPsrs4301033
Merged0
SNP id current4301033
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta0.036
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitadiponectin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004502
Study accessionGCST001465