Human SNP ID | rs430086 |
---|---|
Human chromosome | chr20 |
Human SNP position | 14986433 |
Pig chromosome | chr17 |
Pig SNP position | 26634570 |
PubMed ID | 26030696 |
---|---|
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26030696 |
Study | A Genome-wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes. |
Disease/Trait | Percentage gas trapping |
Initial sample | 3,243 European ancestry chronic obstructive pulmonary disease cases, 901 African American chronic obstructive pulmonary disease cases, 3,062 European ancestry controls, 2,132 African American controls |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 14986433 |
Reported gene | MACROD2 |
Mapped gene | MACROD2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 140733 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs430086-A |
SNPs | rs430086 |
Merged | |
SNP id current | 430086 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (Cases) |
Or beta | 0.16 |
%95 Ci | [-0.1536-0.4736] unit increase |
Platform | Illumina [6900000] (imputed) |
CNV | N |
Mapped trait | gas trapping measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007628 |
Study accession | GCST002942 |