SNP Detail For rs430086
1.Mapping Information
Human SNP ID rs430086
Human chromosome chr20
Human SNP position 14986433
Pig chromosome chr17
Pig SNP position 26634570
2.Annotation Information
PubMed ID26030696
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/26030696
StudyA Genome-wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes.
Disease/TraitPercentage gas trapping
Initial sample3,243 European ancestry chronic obstructive pulmonary disease cases, 901 African American chronic obstructive pulmonary disease cases, 3,062 European ancestry controls, 2,132 African American controls
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position14986433
Reported geneMACROD2
Mapped geneMACROD2
Upstream gene id
Downstream gene id
SNP gene ids140733
Upstream gene distance
Downstream gene distance
SNP risk allelers430086-A
SNPsrs430086
Merged
SNP id current430086
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text(Cases)
Or beta0.16
%95 Ci[-0.1536-0.4736] unit increase
PlatformIllumina [6900000] (imputed)
CNVN
Mapped traitgas trapping measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007628
Study accessionGCST002942