Human SNP ID | rs4298948 |
---|---|
Human chromosome | chr12 |
Human SNP position | 121838349 |
Pig chromosome | chr14 |
Pig SNP position | 32663452 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 12q24.31 |
Chromosome id | chr12 |
Chromosome position | 121838349 |
Reported gene | HPD |
Mapped gene | SETD1B - HPD |
Upstream gene id | 23067 |
Downstream gene id | 3242 |
SNP gene ids | |
Upstream gene distance | 5693 |
Downstream gene distance | 1178 |
SNP risk allele | rs4298948-G |
SNPs | rs4298948 |
Merged | 0 |
SNP id current | 4298948 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.025 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Vigorous activity ) |
Or beta | 0.04 |
%95 Ci | [NR] %awake time increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |