Human SNP ID | rs4296809 |
---|---|
Human chromosome | chr5 |
Human SNP position | 44186566 |
Pig chromosome | chr16 |
Pig SNP position | 30140285 |
PubMed ID | 20171287 |
---|---|
Journal | Neuroimage |
Link | www.ncbi.nlm.nih.gov/pubmed/20171287 |
Study | Voxelwise genome-wide association study (vGWAS). |
Disease/Trait | Brain structure |
Initial sample | 740 European ancestry individuals |
Replication sample | NA |
Region | 5p12 |
Chromosome id | chr5 |
Chromosome position | 44186566 |
Reported gene | intergenic |
Mapped gene | NNT - FGF10 |
Upstream gene id | 23530 |
Downstream gene id | 2255 |
SNP gene ids | |
Upstream gene distance | 481000 |
Downstream gene distance | 116975 |
SNP risk allele | rs4296809-? |
SNPs | rs4296809 |
Merged | 0 |
SNP id current | 4296809 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.15 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [448293] |
CNV | N |
Mapped trait | brain measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004464 |
Study accession | GCST000597 |