SNP Detail For rs4292676
1.Mapping Information
Human SNP ID rs4292676
Human chromosome chr8
Human SNP position 21662736
Pig chromosome chr14
Pig SNP position 6038239
2.Annotation Information
PubMed ID25648963
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25648963
StudyGenome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium.
Disease/TraitVerbal declarative memory
Initial sampleUp to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals
Replication sampleUp to 10,617 European ancestry individuals, up to 3,811 African American individuals
Region8p21.3
Chromosome idchr8
Chromosome position21662736
Reported geneGFRA2, DOK2
Mapped geneLOC105379317 - GFRA2
Upstream gene id105379317
Downstream gene id2675
SNP gene ids
Upstream gene distance44551
Downstream gene distance29278
SNP risk allelers4292676-T
SNPsrs4292676
Merged0
SNP id current4292676
Contextintergenic_variant
Intergenic1
Allele frequency0.39
P value0.000002
Pvalue mlog5.69897000433601
P value text(CERAD-dr)
Or beta0.2708
%95 Ci[0.16-0.38] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitword list delayed recall measurement, memory performance
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874
Study accessionGCST002701