SNP Detail For rs4283605
1.Mapping Information
Human SNP ID rs4283605
Human chromosome chr3
Human SNP position 49641218
Pig chromosome JH118746-1
Pig SNP position 22114
2.Annotation Information
PubMed ID25644384
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25644384
StudyGenetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53鈥?49).
Disease/TraitCognitive function
Initial sample51,719 European ancestry individuals 1,473 Erasmus Rupchen Family individuals, 327 Korculan individuals, 430 Orcadian individuals
Replication sampleNA
Region3p21.31
Chromosome idchr3
Chromosome position49641218
Reported geneBSN
Mapped geneBSN
Upstream gene id
Downstream gene id
SNP gene ids8927
Upstream gene distance
Downstream gene distance
SNP risk allelers4283605-?
SNPsrs4283605
Merged0
SNP id current4283605
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.0296
%95 Ci[0.017-0.042] unit decrease
PlatformAffymetrix, Illumina [2478500] (imputed)
CNVN
Mapped traitcognition
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003925
Study accessionGCST002774